Carnation DB

Dca28333.1

Annotation

6-exons
f-1
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold2821)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28333.1	1	307	579	32.46	307	55	3e-108
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	1177	1521	1553	22.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28333.1	1	306	579	17.44	306	30	1e-39
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	1139	1475	1539	21.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2821	Augustus	mRNA	19343	27211	.	-	.	ID=Dca28333.1;Parent=Dca28333
scaffold2821	Augustus	exon	19343	19642	.	-	.	ID=Dca28333.1.exon1;Parent=Dca28333.1
scaffold2821	Augustus	exon	19842	20144	.	-	.	ID=Dca28333.1.exon2;Parent=Dca28333.1
scaffold2821	Augustus	exon	21206	21304	.	-	.	ID=Dca28333.1.exon3;Parent=Dca28333.1
scaffold2821	Augustus	exon	22511	22596	.	-	.	ID=Dca28333.1.exon4;Parent=Dca28333.1
scaffold2821	Augustus	exon	26146	26396	.	-	.	ID=Dca28333.1.exon5;Parent=Dca28333.1
scaffold2821	Augustus	exon	26511	27211	.	-	.	ID=Dca28333.1.exon6;Parent=Dca28333.1