Dca28341.1
Annotation
- 2-exons
- f-1
- sp|Q9ZVF0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g01550#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold2822)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28341.1 |
163 |
880 |
880 |
27.84 |
718 |
31 |
7e-89
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZVF0_ARATH |
187 |
970 |
1449 |
54.1 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28341.1 |
383 |
868 |
880 |
16.47 |
486 |
30 |
2e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
175 |
621 |
626 |
71.4 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2822 |
Augustus |
mRNA |
29136 |
31857 |
. |
+ |
. |
ID=Dca28341.1;Parent=Dca28341 |
| scaffold2822 |
Augustus |
exon |
29136 |
30163 |
. |
+ |
. |
ID=Dca28341.1.exon1;Parent=Dca28341.1 |
| scaffold2822 |
Augustus |
exon |
30243 |
31857 |
. |
+ |
. |
ID=Dca28341.1.exon2;Parent=Dca28341.1 |
