Dca28403.1
Annotation
- 4-exons
- f-1
- sp|B3GEM0_POPTR#Putative chloroplast 1-deoxy-D-xylulose 5-phosphate synthase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=DXS#GO:0008661;GO:0016114#1F1P0C
- Repeat List (scaffold283)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28403.1 |
29 |
136 |
136 |
68.38 |
108 |
85 |
2e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B3GEM0_POPTR |
3 |
112 |
685 |
16.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28403.1 |
32 |
136 |
136 |
62.5 |
105 |
81 |
2e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G15560.1 |
44 |
148 |
717 |
14.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold283 |
Augustus |
mRNA |
6238 |
8034 |
. |
+ |
. |
ID=Dca28403.1;Parent=Dca28403 |
| scaffold283 |
Augustus |
exon |
6238 |
6348 |
. |
+ |
. |
ID=Dca28403.1.exon1;Parent=Dca28403.1 |
| scaffold283 |
Augustus |
exon |
7236 |
7364 |
. |
+ |
. |
ID=Dca28403.1.exon2;Parent=Dca28403.1 |
| scaffold283 |
Augus-PASA |
exon |
7776 |
7940 |
. |
+ |
. |
ID=Dca28403.1.exon3;Parent=Dca28403.1 |
| scaffold283 |
Augustus |
exon |
8029 |
8034 |
. |
+ |
. |
ID=Dca28403.1.exon4;Parent=Dca28403.1 |
