Carnation DB

Dca28420.1

Annotation

5-exons
f-1
sp|A5ADI5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_043444#GO:0008270#1F0P0C
AT2G39100.1 | Symbols: | RING/U-box superfamily protein | chr2:16317462-16318869 FORWARD LENGTH=296
Repeat List (scaffold283)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28420.1	29	260	290	39.31	232	49	4e-57
Target_name	Start	End	Length	Cov(%)
sp\|A5ADI5_VITVI	37	269	321	72.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28420.1	7	261	290	38.27	255	42	5e-49
Target_name	Start	End	Length	Cov(%)
AT2G39100.1	8	274	296	90.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold283	Augustus	mRNA	146182	149981	.	+	.	ID=Dca28420.1;Parent=Dca28420
scaffold283	Augustus	exon	146182	146516	.	+	.	ID=Dca28420.1.exon1;Parent=Dca28420.1
scaffold283	Augustus	exon	146638	146775	.	+	.	ID=Dca28420.1.exon2;Parent=Dca28420.1
scaffold283	Augustus	exon	148468	148522	.	+	.	ID=Dca28420.1.exon3;Parent=Dca28420.1
scaffold283	Augustus	exon	148943	149196	.	+	.	ID=Dca28420.1.exon4;Parent=Dca28420.1
scaffold283	Augustus	exon	149891	149981	.	+	.	ID=Dca28420.1.exon5;Parent=Dca28420.1