Dca28424.1
Annotation
- 3-exons
- f-1
- sp|A5AVN4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_017217#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- sp|Q7X7F2_ORYSJ#OSJNBa0023J03.14 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0023J03.14#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold2830)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28424.1 |
3 |
50 |
95 |
40 |
48 |
80 |
8e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8W3T9_SILOT |
44 |
91 |
92 |
52.17 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28424.1 |
301 |
385 |
400 |
7.5 |
85 |
36 |
5e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1262 |
1344 |
1428 |
5.81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2830 |
Augustus |
mRNA |
10530 |
13870 |
. |
- |
. |
ID=Dca28424.1;Parent=Dca28424 |
| scaffold2830 |
Augustus |
exon |
10530 |
10624 |
. |
- |
. |
ID=Dca28424.1.exon1;Parent=Dca28424.1 |
| scaffold2830 |
Augustus |
exon |
10715 |
10931 |
. |
- |
. |
ID=Dca28424.1.exon2;Parent=Dca28424.1 |
| scaffold2830 |
Augustus |
exon |
12980 |
13870 |
. |
- |
. |
ID=Dca28424.1.exon3;Parent=Dca28424.1 |
