Carnation DB

Dca28461.1

Annotation

6-exons
f-1
sp|A5AFE2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041217#GO:0003676;GO:0008270;GO:0015074#2F1P0C
AT5G09380.1 | Symbols: | RNA polymerase III RPC4 | chr5:2911313-2913136 REVERSE LENGTH=272
Repeat List (scaffold2835)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28461.1	13	386	660	25.6	374	42	1e-69
Target_name	Start	End	Length	Cov(%)
sp\|A5AFE2_VITVI	2	376	1269	29.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28461.1	379	655	660	16.66	277	40	2e-41
Target_name	Start	End	Length	Cov(%)
Os04t0394500-00	28	291	298	88.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2835	Augustus	mRNA	22452	26376	.	-	.	ID=Dca28461.1;Parent=Dca28461
scaffold2835	Augustus	exon	22452	22604	.	-	.	ID=Dca28461.1.exon1;Parent=Dca28461.1
scaffold2835	Augustus	exon	23003	23290	.	-	.	ID=Dca28461.1.exon2;Parent=Dca28461.1
scaffold2835	Augustus	exon	23378	23469	.	-	.	ID=Dca28461.1.exon3;Parent=Dca28461.1
scaffold2835	Augustus	exon	23608	23668	.	-	.	ID=Dca28461.1.exon4;Parent=Dca28461.1
scaffold2835	Augustus	exon	23749	23972	.	-	.	ID=Dca28461.1.exon5;Parent=Dca28461.1
scaffold2835	Augustus	exon	25212	26376	.	-	.	ID=Dca28461.1.exon6;Parent=Dca28461.1