Dca28475.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold28371)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28475.1 |
1 |
388 |
388 |
76.54 |
388 |
72 |
6e-174
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
583 |
995 |
1501 |
27.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28475.1 |
1 |
365 |
388 |
44.84 |
365 |
45 |
7e-92
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
613 |
998 |
1539 |
25.08 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold28371 |
Augustus |
mRNA |
78 |
1319 |
. |
+ |
. |
ID=Dca28475.1;Parent=Dca28475 |
| scaffold28371 |
Augustus |
exon |
78 |
758 |
. |
+ |
. |
ID=Dca28475.1.exon1;Parent=Dca28475.1 |
| scaffold28371 |
Augustus |
exon |
837 |
1319 |
. |
+ |
. |
ID=Dca28475.1.exon2;Parent=Dca28475.1 |
