Dca28481.1
Annotation
- 3-exons
- f-1
- sp|Q6L3Q3_SOLDE#'chromo' domain containing protein#Solanum demissum (Wild potato)#ORFNames=SDM1_41t00027#GO:0005634;GO:0003676;GO:0008270#2F0P1C
- Repeat List (scaffold2839)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28481.1 |
2 |
139 |
143 |
44.05 |
138 |
37 |
1e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3Q3_SOLDE |
621 |
791 |
815 |
20.98 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28481.1 |
29 |
122 |
143 |
20.27 |
94 |
31 |
6e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
132 |
225 |
230 |
40.86 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2839 |
Augustus |
mRNA |
35525 |
39215 |
. |
- |
. |
ID=Dca28481.1;Parent=Dca28481 |
| scaffold2839 |
Augustus |
exon |
35525 |
35580 |
. |
- |
. |
ID=Dca28481.1.exon1;Parent=Dca28481.1 |
| scaffold2839 |
Augustus |
exon |
36320 |
36609 |
. |
- |
. |
ID=Dca28481.1.exon2;Parent=Dca28481.1 |
| scaffold2839 |
Augustus |
exon |
39130 |
39215 |
. |
- |
. |
ID=Dca28481.1.exon3;Parent=Dca28481.1 |
