Carnation DB

Dca28487.1

Annotation

5-exons
f-1
sp|F6HKT0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g02110#GO:0016021;GO:0005524;GO:0004674#2F0P1C
AT5G20480.1 | Symbols: EFR | EF-TU receptor | chr5:6922497-6925679 FORWARD LENGTH=1031
Repeat List (scaffold284)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28487.1	1209	1314	1319	2.8	106	35	8e-08
Target_name	Start	End	Length	Cov(%)
sp\|F6HKT0_VITVI	1394	1498	1777	5.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28487.1	1203	1314	1319	2.65	112	31	3e-06
Target_name	Start	End	Length	Cov(%)
AT5G20480.1	491	601	1031	10.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold284	Augustus	mRNA	35484	43723	.	-	.	ID=Dca28487.1;Parent=Dca28487
scaffold284	Augustus	exon	35484	35830	.	-	.	ID=Dca28487.1.exon1;Parent=Dca28487.1
scaffold284	Augustus	exon	36161	36346	.	-	.	ID=Dca28487.1.exon2;Parent=Dca28487.1
scaffold284	Augustus	exon	38940	39341	.	-	.	ID=Dca28487.1.exon3;Parent=Dca28487.1
scaffold284	Augustus	exon	39437	42046	.	-	.	ID=Dca28487.1.exon4;Parent=Dca28487.1
scaffold284	Augustus	exon	43309	43723	.	-	.	ID=Dca28487.1.exon5;Parent=Dca28487.1