Dca2869.1
Annotation
- 2-exons
- f-1
- sp|B9NAE7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_278332#GO:0000151;GO:0005488;GO:0004842#2F0P1C
- sp|B9SG36_RICCO#Ubiquitin-protein ligase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1154930#GO:0000151;GO:0005488;GO:0004842#2F0P1C
- Repeat List (scaffold11)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2869.1 |
47 |
367 |
367 |
56.67 |
321 |
65 |
1e-110
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9NAE7_POPTR |
378 |
697 |
698 |
45.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2869.1 |
17 |
358 |
367 |
54.22 |
342 |
59 |
2e-104
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0110500-01 |
474 |
815 |
825 |
41.45 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11 |
Augustus |
mRNA |
725564 |
726885 |
. |
+ |
. |
ID=Dca2869.1;Parent=Dca2869 |
| scaffold11 |
Augustus |
exon |
725564 |
726607 |
. |
+ |
. |
ID=Dca2869.1.exon1;Parent=Dca2869.1 |
| scaffold11 |
Augus-PASA |
exon |
726826 |
726885 |
. |
+ |
. |
ID=Dca2869.1.exon2;Parent=Dca2869.1 |
