Dca2883.1
Annotation
- 4-exons
- f-1
- sp|D7L721_ARALL#Exopolygalacturonase#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_478122#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
- Repeat List (scaffold110)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2883.1 |
61 |
438 |
447 |
47.65 |
378 |
57 |
2e-123
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L721_ARALL |
67 |
442 |
449 |
83.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2883.1 |
61 |
438 |
447 |
45.63 |
378 |
54 |
8e-118
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G14040.1 |
63 |
438 |
445 |
84.49 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold110 |
Augustus |
mRNA |
6885 |
8630 |
. |
+ |
. |
ID=Dca2883.1;Parent=Dca2883 |
| scaffold110 |
Augustus |
exon |
6885 |
7136 |
. |
+ |
. |
ID=Dca2883.1.exon1;Parent=Dca2883.1 |
| scaffold110 |
Augustus |
exon |
7240 |
7560 |
. |
+ |
. |
ID=Dca2883.1.exon2;Parent=Dca2883.1 |
| scaffold110 |
Augustus |
exon |
7649 |
8164 |
. |
+ |
. |
ID=Dca2883.1.exon3;Parent=Dca2883.1 |
| scaffold110 |
Augustus |
exon |
8376 |
8630 |
. |
+ |
. |
ID=Dca2883.1.exon4;Parent=Dca2883.1 |
