Dca28839.1
Annotation
- 2-exons
- f-1
- sp|B9NER8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_595820#unknown#0F0P0C
- Os01t0601675-01 Leucine-rich repeat, N-terminal domain containing protein.
- Repeat List (scaffold288)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28839.1 |
36 |
460 |
461 |
40.34 |
425 |
42 |
2e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9NER8_POPTR |
44 |
476 |
963 |
44.96 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28839.1 |
36 |
460 |
461 |
35.57 |
425 |
37 |
3e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0601675-01 |
48 |
484 |
954 |
45.8 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold288 |
Augustus |
mRNA |
9185 |
12641 |
. |
+ |
. |
ID=Dca28839.1;Parent=Dca28839 |
| scaffold288 |
Augustus |
exon |
9185 |
9292 |
. |
+ |
. |
ID=Dca28839.1.exon1;Parent=Dca28839.1 |
| scaffold288 |
Augustus |
exon |
11364 |
12641 |
. |
+ |
. |
ID=Dca28839.1.exon2;Parent=Dca28839.1 |
