Carnation DB

Dca28944.1

Annotation

6-exons
f-1
sp|D7T3F8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0179g00100#GO:0005488#1F0P0C
Repeat List (scaffold289)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28944.1	1	782	1198	51.08	782	79	0
Target_name	Start	End	Length	Cov(%)
sp\|D7T3F8_VITVI	101	883	886	88.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28944.1	2	782	1198	45.49	781	70	0
Target_name	Start	End	Length	Cov(%)
Os11t0585900-01	74	854	858	91.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold289	Augustus	mRNA	63303	69367	.	-	.	ID=Dca28944.1;Parent=Dca28944
scaffold289	Augustus	exon	63303	64430	.	-	.	ID=Dca28944.1.exon1;Parent=Dca28944.1
scaffold289	Augustus	exon	64638	64769	.	-	.	ID=Dca28944.1.exon2;Parent=Dca28944.1
scaffold289	Augustus	exon	65973	66172	.	-	.	ID=Dca28944.1.exon3;Parent=Dca28944.1
scaffold289	Augus-PASA	exon	66262	66571	.	-	.	ID=Dca28944.1.exon4;Parent=Dca28944.1
scaffold289	Augus-PASA	exon	67138	67429	.	-	.	ID=Dca28944.1.exon5;Parent=Dca28944.1
scaffold289	Augus-PASA	exon	67833	69367	.	-	.	ID=Dca28944.1.exon6;Parent=Dca28944.1