Dca29127.1
Annotation
- 3-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold290)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29127.1 |
7 |
347 |
407 |
45.2 |
341 |
45 |
3e-85
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
6 |
419 |
1307 |
31.67 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29127.1 |
149 |
290 |
407 |
12.28 |
142 |
31 |
3e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
282 |
442 |
1428 |
11.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold290 |
Augustus |
mRNA |
133207 |
134628 |
. |
+ |
. |
ID=Dca29127.1;Parent=Dca29127 |
| scaffold290 |
Augustus |
exon |
133207 |
133303 |
. |
+ |
. |
ID=Dca29127.1.exon1;Parent=Dca29127.1 |
| scaffold290 |
Augustus |
exon |
133436 |
133555 |
. |
+ |
. |
ID=Dca29127.1.exon2;Parent=Dca29127.1 |
| scaffold290 |
Augustus |
exon |
133622 |
134628 |
. |
+ |
. |
ID=Dca29127.1.exon3;Parent=Dca29127.1 |
