Carnation DB

Dca2914.1

Annotation

3-exons
f-1
sp|D7SMW5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0089g00860#GO:0008270#1F0P0C
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:6336023-6337301 FORWARD LENGTH=225
Repeat List (scaffold110)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2914.1	12	93	122	54.09	82	81	1e-36
Target_name	Start	End	Length	Cov(%)
sp\|D7SMW5_VITVI	71	152	221	37.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2914.1	13	87	122	46.72	75	76	2e-33
Target_name	Start	End	Length	Cov(%)
AT4G10160.1	69	143	225	33.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold110	Augus-PASA	mRNA	261870	263222	.	-	.	ID=Dca2914.1;Parent=Dca2914
scaffold110	Augus-PASA	exon	261870	262119	.	-	.	ID=Dca2914.1.exon1;Parent=Dca2914.1
scaffold110	Augus-PASA	exon	262986	263071	.	-	.	ID=Dca2914.1.exon2;Parent=Dca2914.1
scaffold110	Augus-PASA	exon	263190	263222	.	-	.	ID=Dca2914.1.exon3;Parent=Dca2914.1
scaffold110	Augus-PASA	mRNA	261870	262451	.	-	.	ID=Dca2914.2;Parent=Dca2914
scaffold110	Augus-PASA	exon	261870	262119	.	-	.	ID=Dca2914.2.exon1;Parent=Dca2914.2
scaffold110	Augustus	exon	262405	262451	.	-	.	ID=Dca2914.2.exon2;Parent=Dca2914.2