Dca29142.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold29015)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29142.1 |
5 |
144 |
144 |
65.27 |
140 |
54 |
4e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
678 |
854 |
896 |
19.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29142.1 |
4 |
144 |
144 |
37.5 |
141 |
31 |
1e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1180 |
1354 |
1401 |
12.49 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold29015 |
Augustus |
mRNA |
705 |
1249 |
. |
- |
. |
ID=Dca29142.1;Parent=Dca29142 |
| scaffold29015 |
Augustus |
exon |
705 |
1039 |
. |
- |
. |
ID=Dca29142.1.exon1;Parent=Dca29142.1 |
| scaffold29015 |
Augustus |
exon |
1150 |
1249 |
. |
- |
. |
ID=Dca29142.1.exon2;Parent=Dca29142.1 |
