Carnation DB

Dca2917.1

Annotation

8-exons
f-1
sp|D7SMW1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0089g00900#GO:0003677;GO:0006355#1F1P0C
AT1G71260.1 | Symbols: ATWHY2, WHY2 | WHIRLY 2 | chr1:26861849-26863391 REVERSE LENGTH=238
Repeat List (scaffold110)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2917.1	1	189	196	50	189	50	5e-47
Target_name	Start	End	Length	Cov(%)
sp\|D7SMW1_VITVI	1	198	231	85.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2917.1	29	191	196	44.89	163	51	7e-47
Target_name	Start	End	Length	Cov(%)
AT1G71260.1	26	197	238	72.26

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold110	Augustus	mRNA	267708	272120	.	-	.	ID=Dca2917.1;Parent=Dca2917
scaffold110	Augustus	exon	267708	267725	.	-	.	ID=Dca2917.1.exon1;Parent=Dca2917.1
scaffold110	Augustus	exon	268993	269081	.	-	.	ID=Dca2917.1.exon2;Parent=Dca2917.1
scaffold110	Augustus	exon	269641	269714	.	-	.	ID=Dca2917.1.exon3;Parent=Dca2917.1
scaffold110	Augustus	exon	270149	270243	.	-	.	ID=Dca2917.1.exon4;Parent=Dca2917.1
scaffold110	Augustus	exon	270786	270878	.	-	.	ID=Dca2917.1.exon5;Parent=Dca2917.1
scaffold110	Augustus	exon	270985	271070	.	-	.	ID=Dca2917.1.exon6;Parent=Dca2917.1
scaffold110	Augustus	exon	271175	271278	.	-	.	ID=Dca2917.1.exon7;Parent=Dca2917.1
scaffold110	Augustus	exon	272089	272120	.	-	.	ID=Dca2917.1.exon8;Parent=Dca2917.1