Dca29173.1
Annotation
- 3-exons
- f-1
- sp|A5BCC7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040650#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- sp|O22175_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g23330#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold2909)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29173.1 |
1 |
1253 |
1339 |
37.49 |
1253 |
40 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BCC7_VITVI |
96 |
1309 |
1316 |
92.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29173.1 |
314 |
1239 |
1339 |
23.22 |
926 |
34 |
6e-144
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
478 |
1378 |
1401 |
64.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2909 |
Augustus |
mRNA |
363 |
4942 |
. |
- |
. |
ID=Dca29173.1;Parent=Dca29173 |
| scaffold2909 |
Augustus |
exon |
363 |
494 |
. |
- |
. |
ID=Dca29173.1.exon1;Parent=Dca29173.1 |
| scaffold2909 |
Augustus |
exon |
956 |
4536 |
. |
- |
. |
ID=Dca29173.1.exon2;Parent=Dca29173.1 |
| scaffold2909 |
Augustus |
exon |
4636 |
4942 |
. |
- |
. |
ID=Dca29173.1.exon3;Parent=Dca29173.1 |
