Carnation DB

Dca29297.1

Annotation

7-exons
f-1
sp|D7UAP6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0015g01290#GO:0016021#0F0P1C
sp|B9T658_RICCO#Amino acid transporter, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0415150#GO:0016021#0F0P1C
Repeat List (scaffold292)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29297.1	9	461	461	64.64	453	65	2e-179
Target_name	Start	End	Length	Cov(%)
sp\|D7UAP6_VITVI	15	472	472	97.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29297.1	24	460	461	58.13	437	62	2e-162
Target_name	Start	End	Length	Cov(%)
Os04t0470700-01	29	465	467	93.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold292	Augus-PASA	mRNA	232553	236425	.	+	.	ID=Dca29297.1;Parent=Dca29297
scaffold292	Augus-PASA	exon	232553	232628	.	+	.	ID=Dca29297.1.exon1;Parent=Dca29297.1
scaffold292	Augus-PASA	exon	233606	233842	.	+	.	ID=Dca29297.1.exon2;Parent=Dca29297.1
scaffold292	Augus-PASA	exon	234039	234132	.	+	.	ID=Dca29297.1.exon3;Parent=Dca29297.1
scaffold292	Augus-PASA	exon	234597	234811	.	+	.	ID=Dca29297.1.exon4;Parent=Dca29297.1
scaffold292	Augus-PASA	exon	235148	235281	.	+	.	ID=Dca29297.1.exon5;Parent=Dca29297.1
scaffold292	Augus-PASA	exon	235371	235592	.	+	.	ID=Dca29297.1.exon6;Parent=Dca29297.1
scaffold292	Augus-PASA	exon	236018	236425	.	+	.	ID=Dca29297.1.exon7;Parent=Dca29297.1