Dca2944.1
Annotation
- 2-exons
- f-1
- sp|Q9FKA8_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold1101)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2944.1 |
1 |
216 |
264 |
32.19 |
216 |
33 |
8e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FKA8_ARATH |
59 |
307 |
370 |
67.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2944.1 |
1 |
124 |
264 |
14.39 |
124 |
31 |
1e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
49 |
171 |
237 |
51.89 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1101 |
Augustus |
mRNA |
25917 |
26829 |
. |
- |
. |
ID=Dca2944.1;Parent=Dca2944 |
| scaffold1101 |
Augustus |
exon |
25917 |
26338 |
. |
- |
. |
ID=Dca2944.1.exon1;Parent=Dca2944.1 |
| scaffold1101 |
Augustus |
exon |
26457 |
26829 |
. |
- |
. |
ID=Dca2944.1.exon2;Parent=Dca2944.1 |
