Dca29473.1
Annotation
- 3-exons
- f-1
- sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold2939)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29473.1 |
47 |
643 |
644 |
36.18 |
597 |
37 |
4e-118
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG3_BETVU |
136 |
767 |
1114 |
56.73 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29473.1 |
32 |
607 |
644 |
27.79 |
576 |
30 |
7e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
43 |
640 |
857 |
69.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2939 |
Augustus |
mRNA |
49678 |
53041 |
. |
+ |
. |
ID=Dca29473.1;Parent=Dca29473 |
| scaffold2939 |
Augustus |
exon |
49678 |
49763 |
. |
+ |
. |
ID=Dca29473.1.exon1;Parent=Dca29473.1 |
| scaffold2939 |
Augustus |
exon |
51090 |
51850 |
. |
+ |
. |
ID=Dca29473.1.exon2;Parent=Dca29473.1 |
| scaffold2939 |
Augustus |
exon |
51954 |
53041 |
. |
+ |
. |
ID=Dca29473.1.exon3;Parent=Dca29473.1 |
