Carnation DB

Dca29568.1

Annotation

6-exons
f-1
sp|D7U8M4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0032g00620#GO:0015934;GO:0003735;GO:0006412#1F1P1C
sp|B9SDL6_RICCO#50S ribosomal protein L22, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0422010#GO:0015934;GO:0003735;GO:0006412#1F1P1C
Repeat List (scaffold295)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29568.1	1	263	271	59.04	263	60	4e-83
Target_name	Start	End	Length	Cov(%)
sp\|D7U8M4_VITVI	2	264	271	97.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29568.1	1	267	271	54.24	267	55	1e-75
Target_name	Start	End	Length	Cov(%)
AT4G28360.1	2	263	271	96.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold295	Augus-PASA	mRNA	99817	103370	.	-	.	ID=Dca29568.1;Parent=Dca29568
scaffold295	Augus-PASA	exon	99817	100094	.	-	.	ID=Dca29568.1.exon1;Parent=Dca29568.1
scaffold295	Augus-PASA	exon	100303	100369	.	-	.	ID=Dca29568.1.exon2;Parent=Dca29568.1
scaffold295	Augus-PASA	exon	101149	101259	.	-	.	ID=Dca29568.1.exon3;Parent=Dca29568.1
scaffold295	Augus-PASA	exon	101780	101953	.	-	.	ID=Dca29568.1.exon4;Parent=Dca29568.1
scaffold295	Augus-PASA	exon	102838	102908	.	-	.	ID=Dca29568.1.exon5;Parent=Dca29568.1
scaffold295	Augustus	exon	103256	103370	.	-	.	ID=Dca29568.1.exon6;Parent=Dca29568.1