Dca2957.1
Annotation
- 4-exons
- f-1
- sp|Q7F9U4_ORYSJ#OSJNBb0006L01.4 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBb0006L01.4#GO:0008270#1F0P0C
- Repeat List (scaffold1102)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2957.1 |
2 |
317 |
374 |
39.03 |
316 |
44 |
1e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q7F9U4_ORYSJ |
192 |
512 |
513 |
62.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2957.1 |
11 |
252 |
374 |
28.6 |
242 |
45 |
1e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0542200-01 |
432 |
666 |
816 |
28.79 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1102 |
Augustus |
mRNA |
38524 |
39906 |
. |
- |
. |
ID=Dca2957.1;Parent=Dca2957 |
| scaffold1102 |
Augustus |
exon |
38524 |
38549 |
. |
- |
. |
ID=Dca2957.1.exon1;Parent=Dca2957.1 |
| scaffold1102 |
Augustus |
exon |
38638 |
38713 |
. |
- |
. |
ID=Dca2957.1.exon2;Parent=Dca2957.1 |
| scaffold1102 |
Augustus |
exon |
38824 |
38954 |
. |
- |
. |
ID=Dca2957.1.exon3;Parent=Dca2957.1 |
| scaffold1102 |
Augustus |
exon |
39015 |
39906 |
. |
- |
. |
ID=Dca2957.1.exon4;Parent=Dca2957.1 |
