Dca29638.1
Annotation
- 4-exons
- f-1
- sp|B9N364_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_265682#GO:0000166;GO:0016491#2F0P0C
- sp|B9S0Q9_RICCO#Short-chain dehydrogenase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1221570#GO:0000166;GO:0016630#2F0P0C
- Repeat List (scaffold296)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29638.1 |
25 |
198 |
198 |
68.68 |
174 |
79 |
5e-83
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N364_POPTR |
152 |
325 |
327 |
53.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29638.1 |
25 |
198 |
198 |
64.14 |
174 |
73 |
1e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G27760.1 |
201 |
374 |
376 |
46.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold296 |
Augustus |
mRNA |
27140 |
28421 |
. |
+ |
. |
ID=Dca29638.1;Parent=Dca29638 |
| scaffold296 |
Augustus |
exon |
27140 |
27313 |
. |
+ |
. |
ID=Dca29638.1.exon1;Parent=Dca29638.1 |
| scaffold296 |
Augustus |
exon |
27413 |
27505 |
. |
+ |
. |
ID=Dca29638.1.exon2;Parent=Dca29638.1 |
| scaffold296 |
Augustus |
exon |
27630 |
27702 |
. |
+ |
. |
ID=Dca29638.1.exon3;Parent=Dca29638.1 |
| scaffold296 |
Augustus |
exon |
28165 |
28421 |
. |
+ |
. |
ID=Dca29638.1.exon4;Parent=Dca29638.1 |
