Carnation DB

Dca29650.1

Annotation

6-exons
f-1
sp|F6HVR5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0053g00140#GO:0016020;GO:0004576;GO:0006486#1F1P1C
Os04t0675500-03 Similar to Itm1 protein.
Repeat List (scaffold296)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29650.1	29	736	737	87.65	708	92	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HVR5_VITVI	33	740	741	95.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29650.1	5	736	737	86.83	732	88	0
Target_name	Start	End	Length	Cov(%)
AT1G34130.1	4	734	735	99.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold296	Augus-PASA	mRNA	145272	150807	.	-	.	ID=Dca29650.1;Parent=Dca29650
scaffold296	Augus-PASA	exon	145272	145401	.	-	.	ID=Dca29650.1.exon1;Parent=Dca29650.1
scaffold296	Augus-PASA	exon	145862	145921	.	-	.	ID=Dca29650.1.exon2;Parent=Dca29650.1
scaffold296	Augus-PASA	exon	146313	146435	.	-	.	ID=Dca29650.1.exon3;Parent=Dca29650.1
scaffold296	Augustus	exon	146873	147327	.	-	.	ID=Dca29650.1.exon4;Parent=Dca29650.1
scaffold296	Augustus	exon	148244	148780	.	-	.	ID=Dca29650.1.exon5;Parent=Dca29650.1
scaffold296	Augustus	exon	149899	150807	.	-	.	ID=Dca29650.1.exon6;Parent=Dca29650.1