Carnation DB

Dca2985.1

Annotation

10-exons
f-1
sp|B9HR21_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1086398#GO:0016021;GO:0055085#0F1P1C
sp|B9R8F8_RICCO#Tetracycline transporter, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1599560#GO:0016021;GO:0055085#0F1P1C
Repeat List (scaffold11031)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2985.1	3	304	318	42.76	302	38	2e-56
Target_name	Start	End	Length	Cov(%)
sp\|B9HR21_POPTR	101	429	442	74.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2985.1	2	310	318	36.16	309	30	1e-39
Target_name	Start	End	Length	Cov(%)
AT2G16980.2	103	450	461	75.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11031	Augustus	mRNA	5478	8222	.	-	.	ID=Dca2985.1;Parent=Dca2985
scaffold11031	Augustus	exon	5478	5567	.	-	.	ID=Dca2985.1.exon1;Parent=Dca2985.1
scaffold11031	Augustus	exon	5687	5757	.	-	.	ID=Dca2985.1.exon2;Parent=Dca2985.1
scaffold11031	Augustus	exon	5936	6014	.	-	.	ID=Dca2985.1.exon3;Parent=Dca2985.1
scaffold11031	Augustus	exon	6142	6183	.	-	.	ID=Dca2985.1.exon4;Parent=Dca2985.1
scaffold11031	Augustus	exon	6732	6818	.	-	.	ID=Dca2985.1.exon5;Parent=Dca2985.1
scaffold11031	Augustus	exon	6990	7062	.	-	.	ID=Dca2985.1.exon6;Parent=Dca2985.1
scaffold11031	Augustus	exon	7150	7334	.	-	.	ID=Dca2985.1.exon7;Parent=Dca2985.1
scaffold11031	Augustus	exon	7415	7537	.	-	.	ID=Dca2985.1.exon8;Parent=Dca2985.1
scaffold11031	Augustus	exon	7902	8012	.	-	.	ID=Dca2985.1.exon9;Parent=Dca2985.1
scaffold11031	Augustus	exon	8127	8222	.	-	.	ID=Dca2985.1.exon10;Parent=Dca2985.1