Carnation DB

Dca29928.1

Annotation

5-exons
f-1
sp|D7TEC6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0059g01180#GO:0003677;GO:0008270#2F0P0C
AT4G22140.1 | Symbols: EBS | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein | chr4:11728556-11730230 REVERSE LENGTH=234
Repeat List (scaffold2991)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29928.1	1	216	216	84.72	216	85	2e-108
Target_name	Start	End	Length	Cov(%)
sp\|D7TEC6_VITVI	1	215	215	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29928.1	1	209	216	78.7	209	79	2e-102
Target_name	Start	End	Length	Cov(%)
AT4G22140.1	1	217	234	92.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2991	Augus-PASA	mRNA	18242	21412	.	+	.	ID=Dca29928.1;Parent=Dca29928
scaffold2991	Augus-PASA	exon	18242	18314	.	+	.	ID=Dca29928.1.exon1;Parent=Dca29928.1
scaffold2991	Augus-PASA	exon	18788	19130	.	+	.	ID=Dca29928.1.exon2;Parent=Dca29928.1
scaffold2991	Augus-PASA	exon	19260	19328	.	+	.	ID=Dca29928.1.exon3;Parent=Dca29928.1
scaffold2991	Augus-PASA	exon	19931	20069	.	+	.	ID=Dca29928.1.exon4;Parent=Dca29928.1
scaffold2991	Augus-PASA	exon	21386	21412	.	+	.	ID=Dca29928.1.exon5;Parent=Dca29928.1