Carnation DB

Dca2998.1

Annotation

30-exons
f-1
sp|D7TIN4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g05340#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
AT1G59540.1 | Symbols: ZCF125 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:21874083-21879382 FORWARD LENGTH=823
Repeat List (scaffold1104)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2998.1	1	1251	1254	58.61	1251	56	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TIN4_VITVI	1	1249	1250	99.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2998.1	1	1250	1254	52.55	1250	50	0
Target_name	Start	End	Length	Cov(%)
AT3G10180.1	1	1270	1273	99.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1104	Augus-PASA	mRNA	33468	45982	.	-	.	ID=Dca2998.1;Parent=Dca2998
scaffold1104	Augus-PASA	exon	33468	33701	.	-	.	ID=Dca2998.1.exon1;Parent=Dca2998.1
scaffold1104	Augus-PASA	exon	33977	34048	.	-	.	ID=Dca2998.1.exon2;Parent=Dca2998.1
scaffold1104	Augus-PASA	exon	34191	34310	.	-	.	ID=Dca2998.1.exon3;Parent=Dca2998.1
scaffold1104	Augustus	exon	34414	34578	.	-	.	ID=Dca2998.1.exon4;Parent=Dca2998.1
scaffold1104	Augustus	exon	34673	34751	.	-	.	ID=Dca2998.1.exon5;Parent=Dca2998.1
scaffold1104	Augustus	exon	36085	36182	.	-	.	ID=Dca2998.1.exon6;Parent=Dca2998.1
scaffold1104	Augustus	exon	36646	36786	.	-	.	ID=Dca2998.1.exon7;Parent=Dca2998.1
scaffold1104	Augustus	exon	37069	37275	.	-	.	ID=Dca2998.1.exon8;Parent=Dca2998.1
scaffold1104	Augustus	exon	37379	37564	.	-	.	ID=Dca2998.1.exon9;Parent=Dca2998.1
scaffold1104	Augustus	exon	37969	38172	.	-	.	ID=Dca2998.1.exon10;Parent=Dca2998.1
scaffold1104	Augustus	exon	38260	38346	.	-	.	ID=Dca2998.1.exon11;Parent=Dca2998.1
scaffold1104	Augustus	exon	38435	38548	.	-	.	ID=Dca2998.1.exon12;Parent=Dca2998.1
scaffold1104	Augustus	exon	38683	38832	.	-	.	ID=Dca2998.1.exon13;Parent=Dca2998.1
scaffold1104	Augustus	exon	38994	39077	.	-	.	ID=Dca2998.1.exon14;Parent=Dca2998.1
scaffold1104	Augustus	exon	39461	39565	.	-	.	ID=Dca2998.1.exon15;Parent=Dca2998.1
scaffold1104	Augustus	exon	39713	39880	.	-	.	ID=Dca2998.1.exon16;Parent=Dca2998.1
scaffold1104	Augustus	exon	39966	40031	.	-	.	ID=Dca2998.1.exon17;Parent=Dca2998.1
scaffold1104	Augustus	exon	40178	40420	.	-	.	ID=Dca2998.1.exon18;Parent=Dca2998.1
scaffold1104	Augustus	exon	42544	42696	.	-	.	ID=Dca2998.1.exon19;Parent=Dca2998.1
scaffold1104	Augustus	exon	42788	42847	.	-	.	ID=Dca2998.1.exon20;Parent=Dca2998.1
scaffold1104	Augustus	exon	42955	43023	.	-	.	ID=Dca2998.1.exon21;Parent=Dca2998.1
scaffold1104	Augustus	exon	43132	43212	.	-	.	ID=Dca2998.1.exon22;Parent=Dca2998.1
scaffold1104	Augustus	exon	43286	43388	.	-	.	ID=Dca2998.1.exon23;Parent=Dca2998.1
scaffold1104	Augustus	exon	43466	43611	.	-	.	ID=Dca2998.1.exon24;Parent=Dca2998.1
scaffold1104	Augustus	exon	43755	43855	.	-	.	ID=Dca2998.1.exon25;Parent=Dca2998.1
scaffold1104	Augustus	exon	44140	44221	.	-	.	ID=Dca2998.1.exon26;Parent=Dca2998.1
scaffold1104	Augustus	exon	44306	44419	.	-	.	ID=Dca2998.1.exon27;Parent=Dca2998.1
scaffold1104	Augustus	exon	44684	44802	.	-	.	ID=Dca2998.1.exon28;Parent=Dca2998.1
scaffold1104	Augustus	exon	45376	45465	.	-	.	ID=Dca2998.1.exon29;Parent=Dca2998.1
scaffold1104	Augustus	exon	45859	45982	.	-	.	ID=Dca2998.1.exon30;Parent=Dca2998.1