Carnation DB

Dca29988.1

Annotation

9-exons
f-1
sp|B9GVI7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_830957#GO:0005509#1F0P0C
Os08t0439150-00 Similar to DCN1-like protein 4.
Repeat List (scaffold3)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29988.1	1	221	223	80.71	221	79	3e-101
Target_name	Start	End	Length	Cov(%)
sp\|B9GVI7_POPTR	1	230	232	99.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29988.1	8	221	223	69.05	214	70	5e-90
Target_name	Start	End	Length	Cov(%)
AT1G15860.3	12	234	236	94.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3	Augus-PASA	mRNA	184507	187145	.	+	.	ID=Dca29988.1;Parent=Dca29988
scaffold3	Augus-PASA	exon	184507	184567	.	+	.	ID=Dca29988.1.exon1;Parent=Dca29988.1
scaffold3	Augus-PASA	exon	185440	185524	.	+	.	ID=Dca29988.1.exon2;Parent=Dca29988.1
scaffold3	Augus-PASA	exon	185877	185951	.	+	.	ID=Dca29988.1.exon3;Parent=Dca29988.1
scaffold3	Augus-PASA	exon	186057	186093	.	+	.	ID=Dca29988.1.exon4;Parent=Dca29988.1
scaffold3	Augus-PASA	exon	186271	186354	.	+	.	ID=Dca29988.1.exon5;Parent=Dca29988.1
scaffold3	Augus-PASA	exon	186444	186504	.	+	.	ID=Dca29988.1.exon6;Parent=Dca29988.1
scaffold3	Augus-PASA	exon	186601	186707	.	+	.	ID=Dca29988.1.exon7;Parent=Dca29988.1
scaffold3	Augus-PASA	exon	186842	186907	.	+	.	ID=Dca29988.1.exon8;Parent=Dca29988.1
scaffold3	Augus-PASA	exon	187050	187145	.	+	.	ID=Dca29988.1.exon9;Parent=Dca29988.1