Dca29990.1
Annotation
- 4-exons
- f-1
- sp|B9GMC6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_847747#unknown#0F0P0C
- Repeat List (scaffold3)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29990.1 |
1 |
180 |
230 |
40.86 |
180 |
52 |
1e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GMC6_POPTR |
1 |
159 |
236 |
67.37 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29990.1 |
1 |
180 |
230 |
29.56 |
180 |
38 |
1e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G80700.1 |
1 |
169 |
214 |
78.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3 |
Augustus |
mRNA |
192569 |
194691 |
. |
+ |
. |
ID=Dca29990.1;Parent=Dca29990 |
| scaffold3 |
Augustus |
exon |
192569 |
192831 |
. |
+ |
. |
ID=Dca29990.1.exon1;Parent=Dca29990.1 |
| scaffold3 |
Augustus |
exon |
193490 |
193539 |
. |
+ |
. |
ID=Dca29990.1.exon2;Parent=Dca29990.1 |
| scaffold3 |
Augustus |
exon |
193642 |
193694 |
. |
+ |
. |
ID=Dca29990.1.exon3;Parent=Dca29990.1 |
| scaffold3 |
Augustus |
exon |
194365 |
194691 |
. |
+ |
. |
ID=Dca29990.1.exon4;Parent=Dca29990.1 |
