Carnation DB

Dca29992.1

Annotation

5-exons
f-1
sp|B9SMU4_RICCO#Golgi snare 11 protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0470970#GO:0005801;GO:0000139;GO:0016021;GO:0006888#0F1P3C
Repeat List (scaffold3)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29992.1	1	219	219	81.27	219	80	1e-97
Target_name	Start	End	Length	Cov(%)
sp\|B9SMU4_RICCO	1	224	253	88.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29992.1	1	219	219	77.62	219	77	4e-95
Target_name	Start	End	Length	Cov(%)
AT1G15880.1	1	223	223	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3	Augus-PASA	mRNA	212227	214653	.	-	.	ID=Dca29992.1;Parent=Dca29992
scaffold3	Augus-PASA	exon	212227	212340	.	-	.	ID=Dca29992.1.exon1;Parent=Dca29992.1
scaffold3	Augus-PASA	exon	212455	212568	.	-	.	ID=Dca29992.1.exon2;Parent=Dca29992.1
scaffold3	Augus-PASA	exon	212939	213103	.	-	.	ID=Dca29992.1.exon3;Parent=Dca29992.1
scaffold3	Augus-PASA	exon	213224	213451	.	-	.	ID=Dca29992.1.exon4;Parent=Dca29992.1
scaffold3	Augus-PASA	exon	214615	214653	.	-	.	ID=Dca29992.1.exon5;Parent=Dca29992.1