Carnation DB

Dca29993.1

Annotation

5-exons
f-1
sp|D7U871_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0070g00130#GO:0005840;GO:0003735;GO:0006412#1F1P1C
sp|Q2PYX6_SOLTU#Putative 60S ribosomal protein L7-like protein#Solanum tuberosum (Potato)#unknown#GO:0005840;GO:0003735;GO:0006412#1F1P1C
Repeat List (scaffold3)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29993.1	1	246	246	59.75	246	60	1e-81
Target_name	Start	End	Length	Cov(%)
sp\|D7U871_VITVI	1	246	246	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29993.1	1	246	246	54.47	246	55	1e-72
Target_name	Start	End	Length	Cov(%)
Os08t0542100-01	29	275	276	89.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3	Augustus	mRNA	224793	227617	.	+	.	ID=Dca29993.1;Parent=Dca29993
scaffold3	Augustus	exon	224793	224978	.	+	.	ID=Dca29993.1.exon1;Parent=Dca29993.1
scaffold3	Augus-PASA	exon	226407	226504	.	+	.	ID=Dca29993.1.exon2;Parent=Dca29993.1
scaffold3	Augus-PASA	exon	226590	226727	.	+	.	ID=Dca29993.1.exon3;Parent=Dca29993.1
scaffold3	Augus-PASA	exon	227204	227306	.	+	.	ID=Dca29993.1.exon4;Parent=Dca29993.1
scaffold3	Augus-PASA	exon	227402	227617	.	+	.	ID=Dca29993.1.exon5;Parent=Dca29993.1