Dca3001.1
Annotation
- 3-exons
- f-1
- sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q8LK27_BRANA#Putative AP endonuclease/reverse transcriptase#Brassica napus (Rape)#unknown#GO:0004519;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold1104)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3001.1 |
180 |
838 |
869 |
28.53 |
659 |
38 |
4e-128
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG1_BETVU |
374 |
1035 |
1110 |
59.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3001.1 |
198 |
675 |
869 |
18.41 |
478 |
33 |
2e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
309 |
796 |
857 |
56.94 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1104 |
Augustus |
mRNA |
66449 |
71573 |
. |
- |
. |
ID=Dca3001.1;Parent=Dca3001 |
| scaffold1104 |
Augustus |
exon |
66449 |
66537 |
. |
- |
. |
ID=Dca3001.1.exon1;Parent=Dca3001.1 |
| scaffold1104 |
Augustus |
exon |
68976 |
70963 |
. |
- |
. |
ID=Dca3001.1.exon2;Parent=Dca3001.1 |
| scaffold1104 |
Augustus |
exon |
71041 |
71573 |
. |
- |
. |
ID=Dca3001.1.exon3;Parent=Dca3001.1 |
