Carnation DB

Dca30019.1

Annotation

10-exons
f-1
sp|F6GZK9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g08030#unknown#0F0P0C
sp|B9RX49_RICCO#Catalytic, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0817300#unknown#0F0P0C
Repeat List (scaffold3)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30019.1	45	340	347	58.5	296	69	7e-120
Target_name	Start	End	Length	Cov(%)
sp\|F6GZK9_VITVI	33	326	397	74.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30019.1	65	335	347	51	271	66	2e-110
Target_name	Start	End	Length	Cov(%)
AT5G64460.2	1	271	282	96.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3	Augus-PASA	mRNA	469901	472649	.	+	.	ID=Dca30019.1;Parent=Dca30019
scaffold3	Augus-PASA	exon	469901	470090	.	+	.	ID=Dca30019.1.exon1;Parent=Dca30019.1
scaffold3	Augus-PASA	exon	470894	470955	.	+	.	ID=Dca30019.1.exon2;Parent=Dca30019.1
scaffold3	Augus-PASA	exon	471055	471162	.	+	.	ID=Dca30019.1.exon3;Parent=Dca30019.1
scaffold3	Augus-PASA	exon	471285	471364	.	+	.	ID=Dca30019.1.exon4;Parent=Dca30019.1
scaffold3	Augus-PASA	exon	471467	471629	.	+	.	ID=Dca30019.1.exon5;Parent=Dca30019.1
scaffold3	Augus-PASA	exon	471747	471821	.	+	.	ID=Dca30019.1.exon6;Parent=Dca30019.1
scaffold3	Augus-PASA	exon	471898	471986	.	+	.	ID=Dca30019.1.exon7;Parent=Dca30019.1
scaffold3	Augus-PASA	exon	472140	472259	.	+	.	ID=Dca30019.1.exon8;Parent=Dca30019.1
scaffold3	Augus-PASA	exon	472347	472391	.	+	.	ID=Dca30019.1.exon9;Parent=Dca30019.1
scaffold3	Augus-PASA	exon	472538	472649	.	+	.	ID=Dca30019.1.exon10;Parent=Dca30019.1