Carnation DB

Dca30029.1

Annotation

19-exons
f-1
sp|B9RX74_RICCO#Methylmalonate-semialdehyde dehydrogenase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0818850#GO:0004491#1F0P0C
Repeat List (scaffold3)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30029.1	1	532	533	84.99	532	85	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RX74_RICCO	2	540	541	99.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30029.1	11	532	533	79.73	522	81	0
Target_name	Start	End	Length	Cov(%)
AT2G14170.1	82	606	607	86.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3	Augus-PASA	mRNA	557005	563669	.	+	.	ID=Dca30029.1;Parent=Dca30029
scaffold3	Augus-PASA	exon	557005	557029	.	+	.	ID=Dca30029.1.exon1;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	557814	557902	.	+	.	ID=Dca30029.1.exon2;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	558643	558714	.	+	.	ID=Dca30029.1.exon3;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	558829	558990	.	+	.	ID=Dca30029.1.exon4;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	559083	559161	.	+	.	ID=Dca30029.1.exon5;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	559244	559398	.	+	.	ID=Dca30029.1.exon6;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	559647	559710	.	+	.	ID=Dca30029.1.exon7;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	559866	559945	.	+	.	ID=Dca30029.1.exon8;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	560047	560112	.	+	.	ID=Dca30029.1.exon9;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	560303	560353	.	+	.	ID=Dca30029.1.exon10;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	560437	560588	.	+	.	ID=Dca30029.1.exon11;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	560909	560999	.	+	.	ID=Dca30029.1.exon12;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	561471	561551	.	+	.	ID=Dca30029.1.exon13;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	561826	561903	.	+	.	ID=Dca30029.1.exon14;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	562005	562040	.	+	.	ID=Dca30029.1.exon15;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	562149	562192	.	+	.	ID=Dca30029.1.exon16;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	562290	562368	.	+	.	ID=Dca30029.1.exon17;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	563345	563435	.	+	.	ID=Dca30029.1.exon18;Parent=Dca30029.1
scaffold3	Augus-PASA	exon	563563	563669	.	+	.	ID=Dca30029.1.exon19;Parent=Dca30029.1