Carnation DB

Dca30150.1

Annotation

6-exons
f-1
sp|F6GSI3_VITVI#Histone deacetylase#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g09070#GO:0005634;GO:0034739;GO:0032041;GO:0046969;GO:0046970;GO:0006355;GO:0006351#4F2P1C
Repeat List (scaffold3000)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30150.1	197	507	507	53.84	311	88	2e-167
Target_name	Start	End	Length	Cov(%)
sp\|F6GSI3_VITVI	120	430	464	67.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30150.1	198	507	507	51.28	310	84	4e-155
Target_name	Start	End	Length	Cov(%)
AT5G63110.1	121	433	471	66.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3000	Augustus	mRNA	33204	38477	.	-	.	ID=Dca30150.1;Parent=Dca30150
scaffold3000	Augustus	exon	33204	33281	.	-	.	ID=Dca30150.1.exon1;Parent=Dca30150.1
scaffold3000	Augustus	exon	33382	33472	.	-	.	ID=Dca30150.1.exon2;Parent=Dca30150.1
scaffold3000	Augustus	exon	33748	33890	.	-	.	ID=Dca30150.1.exon3;Parent=Dca30150.1
scaffold3000	Augustus	exon	33984	34424	.	-	.	ID=Dca30150.1.exon4;Parent=Dca30150.1
scaffold3000	Augustus	exon	36059	36229	.	-	.	ID=Dca30150.1.exon5;Parent=Dca30150.1
scaffold3000	Augustus	exon	37878	38477	.	-	.	ID=Dca30150.1.exon6;Parent=Dca30150.1