Dca30198.1
Annotation
- 4-exons
- f-1
- sp|A5BPR9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_013624#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold301)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30198.1 |
1 |
1033 |
1036 |
51.06 |
1033 |
49 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BPR9_VITVI |
12 |
1055 |
1269 |
82.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30198.1 |
749 |
1036 |
1036 |
13.89 |
288 |
50 |
2e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
913 |
1199 |
1428 |
20.09 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold301 |
Augustus |
mRNA |
6604 |
10375 |
. |
- |
. |
ID=Dca30198.1;Parent=Dca30198 |
| scaffold301 |
Augustus |
exon |
6604 |
7526 |
. |
- |
. |
ID=Dca30198.1.exon1;Parent=Dca30198.1 |
| scaffold301 |
Augustus |
exon |
7745 |
8504 |
. |
- |
. |
ID=Dca30198.1.exon2;Parent=Dca30198.1 |
| scaffold301 |
Augustus |
exon |
8820 |
9444 |
. |
- |
. |
ID=Dca30198.1.exon3;Parent=Dca30198.1 |
| scaffold301 |
Augustus |
exon |
9573 |
10375 |
. |
- |
. |
ID=Dca30198.1.exon4;Parent=Dca30198.1 |
