Carnation DB

Dca30202.1

Annotation

5-exons
f-1
sp|B9I8Q3_POPTR#Ketopantoate hydroxymethyltransferase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_572313#GO:0003864;GO:0008168;GO:0015940#2F1P0C
Repeat List (scaffold301)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30202.1	1	345	349	82.52	345	83	7e-165
Target_name	Start	End	Length	Cov(%)
sp\|B9I8Q3_POPTR	1	348	360	96.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30202.1	5	345	349	79.65	341	82	2e-164
Target_name	Start	End	Length	Cov(%)
AT2G46110.1	3	343	347	98.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold301	Augus-PASA	mRNA	52714	54678	.	-	.	ID=Dca30202.1;Parent=Dca30202
scaffold301	Augus-PASA	exon	52714	52947	.	-	.	ID=Dca30202.1.exon1;Parent=Dca30202.1
scaffold301	Augus-PASA	exon	53061	53114	.	-	.	ID=Dca30202.1.exon2;Parent=Dca30202.1
scaffold301	Augus-PASA	exon	53250	53396	.	-	.	ID=Dca30202.1.exon3;Parent=Dca30202.1
scaffold301	Augus-PASA	exon	53482	53688	.	-	.	ID=Dca30202.1.exon4;Parent=Dca30202.1
scaffold301	Augus-PASA	exon	54271	54678	.	-	.	ID=Dca30202.1.exon5;Parent=Dca30202.1