Carnation DB

Dca30205.1

Annotation

8-exons
f-1
sp|B9I8R0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_774438#unknown#0F0P0C
Repeat List (scaffold301)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30205.1	11	365	369	60.97	355	64	2e-111
Target_name	Start	End	Length	Cov(%)
sp\|B9I8R0_POPTR	55	394	398	85.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30205.1	13	365	369	52.3	353	55	3e-97
Target_name	Start	End	Length	Cov(%)
AT2G46200.1	55	373	382	83.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold301	Augus-PASA	mRNA	61670	64329	.	-	.	ID=Dca30205.1;Parent=Dca30205
scaffold301	Augus-PASA	exon	61670	61748	.	-	.	ID=Dca30205.1.exon1;Parent=Dca30205.1
scaffold301	Augus-PASA	exon	61837	61877	.	-	.	ID=Dca30205.1.exon2;Parent=Dca30205.1
scaffold301	Augus-PASA	exon	62043	62425	.	-	.	ID=Dca30205.1.exon3;Parent=Dca30205.1
scaffold301	Augus-PASA	exon	62605	62677	.	-	.	ID=Dca30205.1.exon4;Parent=Dca30205.1
scaffold301	Augus-PASA	exon	62877	62942	.	-	.	ID=Dca30205.1.exon5;Parent=Dca30205.1
scaffold301	Augustus	exon	63271	63354	.	-	.	ID=Dca30205.1.exon6;Parent=Dca30205.1
scaffold301	Augustus	exon	63519	63873	.	-	.	ID=Dca30205.1.exon7;Parent=Dca30205.1
scaffold301	Augustus	exon	64301	64329	.	-	.	ID=Dca30205.1.exon8;Parent=Dca30205.1