Dca3021.1
Annotation
- 4-exons
- f-1
- sp|B9MZJ8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_827334#unknown#0F0P0C
- AT3G05090.1 | Symbols: LRS1 | Transducin/WD40 repeat-like superfamily protein | chr3:1418573-1422723 REVERSE LENGTH=753
- Repeat List (scaffold1105)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3021.1 |
125 |
206 |
226 |
31.41 |
82 |
87 |
2e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MZJ8_POPTR |
456 |
537 |
761 |
10.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3021.1 |
138 |
213 |
226 |
24.77 |
76 |
73 |
2e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G05090.1 |
466 |
542 |
753 |
10.22 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1105 |
Augustus |
mRNA |
80750 |
83378 |
. |
- |
. |
ID=Dca3021.1;Parent=Dca3021 |
| scaffold1105 |
Augustus |
exon |
80750 |
80881 |
. |
- |
. |
ID=Dca3021.1.exon1;Parent=Dca3021.1 |
| scaffold1105 |
Augustus |
exon |
81992 |
82126 |
. |
- |
. |
ID=Dca3021.1.exon2;Parent=Dca3021.1 |
| scaffold1105 |
Augustus |
exon |
82294 |
82355 |
. |
- |
. |
ID=Dca3021.1.exon3;Parent=Dca3021.1 |
| scaffold1105 |
Augustus |
exon |
83027 |
83378 |
. |
- |
. |
ID=Dca3021.1.exon4;Parent=Dca3021.1 |
