Dca30215.1
Annotation
- 4-exons
- f-1
- sp|B9HDK6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_561006#GO:0016881;GO:0005524#2F0P0C
- Os02t0261100-01 Ubiquitin-conjugating enzyme OsUBC5b.
- Repeat List (scaffold301)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30215.1 |
1 |
148 |
148 |
96.62 |
148 |
97 |
6e-82
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HDK6_POPTR |
76 |
223 |
223 |
66.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30215.1 |
1 |
148 |
148 |
95.27 |
148 |
96 |
9e-82
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0261100-01 |
1 |
148 |
149 |
99.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold301 |
Augus-PASA |
mRNA |
134214 |
136698 |
. |
+ |
. |
ID=Dca30215.1;Parent=Dca30215 |
| scaffold301 |
Augus-PASA |
exon |
134214 |
134283 |
. |
+ |
. |
ID=Dca30215.1.exon1;Parent=Dca30215.1 |
| scaffold301 |
Augus-PASA |
exon |
135651 |
135778 |
. |
+ |
. |
ID=Dca30215.1.exon2;Parent=Dca30215.1 |
| scaffold301 |
Augus-PASA |
exon |
136363 |
136467 |
. |
+ |
. |
ID=Dca30215.1.exon3;Parent=Dca30215.1 |
| scaffold301 |
Augus-PASA |
exon |
136555 |
136698 |
. |
+ |
. |
ID=Dca30215.1.exon4;Parent=Dca30215.1 |
