Carnation DB

Dca30217.1

Annotation

11-exons
f-1
sp|D7UCL1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0046g01350#GO:0005874;GO:0005525;GO:0003924;GO:0007017;GO:0051258#2F2P1C
AT5G05620.1 | Symbols: TUBG2, ATGCP2, GCP2 | gamma-tubulin complex protein 2 | chr5:1679340-1681719 FORWARD LENGTH=474
Repeat List (scaffold301)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30217.1	1	472	473	94.71	472	95	0
Target_name	Start	End	Length	Cov(%)
sp\|D7UCL1_VITVI	1	472	474	99.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30217.1	1	472	473	93.86	472	95	0
Target_name	Start	End	Length	Cov(%)
AT5G05620.1	1	472	474	99.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold301	Augustus	mRNA	154635	160001	.	-	.	ID=Dca30217.1;Parent=Dca30217
scaffold301	Augustus	exon	154635	154700	.	-	.	ID=Dca30217.1.exon1;Parent=Dca30217.1
scaffold301	Augustus	exon	154790	154894	.	-	.	ID=Dca30217.1.exon2;Parent=Dca30217.1
scaffold301	Augustus	exon	155517	155645	.	-	.	ID=Dca30217.1.exon3;Parent=Dca30217.1
scaffold301	Augustus	exon	155794	155838	.	-	.	ID=Dca30217.1.exon4;Parent=Dca30217.1
scaffold301	Augustus	exon	156001	156075	.	-	.	ID=Dca30217.1.exon5;Parent=Dca30217.1
scaffold301	Augustus	exon	156235	156339	.	-	.	ID=Dca30217.1.exon6;Parent=Dca30217.1
scaffold301	Augus-PASA	exon	156425	156478	.	-	.	ID=Dca30217.1.exon7;Parent=Dca30217.1
scaffold301	Augus-PASA	exon	157017	157417	.	-	.	ID=Dca30217.1.exon8;Parent=Dca30217.1
scaffold301	Augus-PASA	exon	157676	157787	.	-	.	ID=Dca30217.1.exon9;Parent=Dca30217.1
scaffold301	Augus-PASA	exon	157999	158199	.	-	.	ID=Dca30217.1.exon10;Parent=Dca30217.1
scaffold301	Augus-PASA	exon	159873	160001	.	-	.	ID=Dca30217.1.exon11;Parent=Dca30217.1