Dca30228.1
Annotation
- 3-exons
- f-1
- sp|E7BQD5_SILLA#Gag-pol polyprotein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3011)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30228.1 |
2 |
336 |
489 |
39.26 |
335 |
46 |
1e-89
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E7BQD5_SILLA |
397 |
814 |
1475 |
28.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30228.1 |
176 |
309 |
489 |
12.06 |
134 |
40 |
3e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
626 |
769 |
1539 |
9.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3011 |
Augustus |
mRNA |
28408 |
30114 |
. |
+ |
. |
ID=Dca30228.1;Parent=Dca30228 |
| scaffold3011 |
Augustus |
exon |
28408 |
28554 |
. |
+ |
. |
ID=Dca30228.1.exon1;Parent=Dca30228.1 |
| scaffold3011 |
Augustus |
exon |
28644 |
29062 |
. |
+ |
. |
ID=Dca30228.1.exon2;Parent=Dca30228.1 |
| scaffold3011 |
Augustus |
exon |
29211 |
30114 |
. |
+ |
. |
ID=Dca30228.1.exon3;Parent=Dca30228.1 |
