Dca30240.1
Annotation
- 2-exons
- f-1
- sp|Q7G209_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os10g38370#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- Repeat List (scaffold3013)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30240.1 |
1 |
262 |
262 |
61.45 |
262 |
57 |
2e-86
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q7G209_ORYSJ |
917 |
1203 |
1663 |
17.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30240.1 |
1 |
262 |
262 |
43.89 |
262 |
35 |
6e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
2 |
333 |
591 |
56.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3013 |
Augustus |
mRNA |
50936 |
51936 |
. |
+ |
. |
ID=Dca30240.1;Parent=Dca30240 |
| scaffold3013 |
Augustus |
exon |
50936 |
51176 |
. |
+ |
. |
ID=Dca30240.1.exon1;Parent=Dca30240.1 |
| scaffold3013 |
Augustus |
exon |
51389 |
51936 |
. |
+ |
. |
ID=Dca30240.1.exon2;Parent=Dca30240.1 |
