Dca30255.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold3015)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30255.1 |
63 |
617 |
659 |
62.51 |
555 |
75 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
531 |
1086 |
1717 |
32.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30255.1 |
393 |
615 |
659 |
11.83 |
223 |
35 |
3e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
237 |
440 |
707 |
28.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3015 |
Augustus |
mRNA |
29376 |
31565 |
. |
+ |
. |
ID=Dca30255.1;Parent=Dca30255 |
| scaffold3015 |
Augustus |
exon |
29376 |
29556 |
. |
+ |
. |
ID=Dca30255.1.exon1;Parent=Dca30255.1 |
| scaffold3015 |
Augustus |
exon |
29640 |
31316 |
. |
+ |
. |
ID=Dca30255.1.exon2;Parent=Dca30255.1 |
| scaffold3015 |
Augustus |
exon |
31444 |
31565 |
. |
+ |
. |
ID=Dca30255.1.exon3;Parent=Dca30255.1 |
