Dca30275.1
Annotation
- 2-exons
- f-1
- sp|Q9ZPU4_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g13940#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold3019)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30275.1 |
35 |
119 |
119 |
40.33 |
85 |
57 |
2e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZPU4_ARATH |
1362 |
1443 |
1501 |
5.46 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30275.1 |
45 |
119 |
119 |
28.57 |
75 |
46 |
1e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
468 |
542 |
1262 |
5.94 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3019 |
Augustus |
mRNA |
6136 |
7546 |
. |
- |
. |
ID=Dca30275.1;Parent=Dca30275 |
| scaffold3019 |
Augustus |
exon |
6136 |
6389 |
. |
- |
. |
ID=Dca30275.1.exon1;Parent=Dca30275.1 |
| scaffold3019 |
Augustus |
exon |
7441 |
7546 |
. |
- |
. |
ID=Dca30275.1.exon2;Parent=Dca30275.1 |
