Dca30298.1
Annotation
- 3-exons
- f-1
- sp|C5XFY9_SORBI#Putative uncharacterized protein Sb03g030500#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb03g030500#GO:0005737;GO:0005524;GO:0017111;GO:0030163#2F1P1C
- AT1G53750.1 | Symbols: RPT1A | regulatory particle triple-A 1A | chr1:20065921-20068324 REVERSE LENGTH=426
- Repeat List (scaffold302)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30298.1 |
7 |
90 |
105 |
58.09 |
84 |
73 |
4e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C5XFY9_SORBI |
6 |
87 |
426 |
19.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30298.1 |
7 |
90 |
105 |
57.14 |
84 |
72 |
5e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G53750.1 |
6 |
87 |
426 |
19.24 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold302 |
Augustus |
mRNA |
197566 |
200087 |
. |
- |
. |
ID=Dca30298.1;Parent=Dca30298 |
| scaffold302 |
Augustus |
exon |
197566 |
197705 |
. |
- |
. |
ID=Dca30298.1.exon1;Parent=Dca30298.1 |
| scaffold302 |
Augustus |
exon |
198495 |
198576 |
. |
- |
. |
ID=Dca30298.1.exon2;Parent=Dca30298.1 |
| scaffold302 |
Augustus |
exon |
199992 |
200087 |
. |
- |
. |
ID=Dca30298.1.exon3;Parent=Dca30298.1 |
