Dca30301.1
Annotation
- 4-exons
- f-1
- sp|A5AE14_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_036538#GO:0003676;GO:0008270#2F0P0C
- sp|Q9SJ99_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g24660#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3020)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30301.1 |
44 |
200 |
313 |
29.39 |
157 |
49 |
1e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AE14_VITVI |
680 |
867 |
1157 |
16.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30301.1 |
13 |
192 |
313 |
26.19 |
180 |
38 |
1e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
55 |
257 |
1262 |
16.08 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3020 |
Augustus |
mRNA |
10820 |
15889 |
. |
- |
. |
ID=Dca30301.1;Parent=Dca30301 |
| scaffold3020 |
Augustus |
exon |
10820 |
11085 |
. |
- |
. |
ID=Dca30301.1.exon1;Parent=Dca30301.1 |
| scaffold3020 |
Augustus |
exon |
11784 |
11882 |
. |
- |
. |
ID=Dca30301.1.exon2;Parent=Dca30301.1 |
| scaffold3020 |
Augustus |
exon |
15220 |
15412 |
. |
- |
. |
ID=Dca30301.1.exon3;Parent=Dca30301.1 |
| scaffold3020 |
Augustus |
exon |
15506 |
15889 |
. |
- |
. |
ID=Dca30301.1.exon4;Parent=Dca30301.1 |
