Dca3031.1
Annotation
- 4-exons
- f-1
- sp|A5CBM0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_001478#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold1106)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3031.1 |
1 |
267 |
283 |
54.41 |
267 |
58 |
2e-84
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BCL1_VITVI |
216 |
477 |
478 |
54.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3031.1 |
6 |
248 |
283 |
36.39 |
243 |
43 |
5e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1152 |
1389 |
1401 |
16.98 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1106 |
Augustus |
mRNA |
13962 |
18862 |
. |
- |
. |
ID=Dca3031.1;Parent=Dca3031 |
| scaffold1106 |
Augustus |
exon |
13962 |
14707 |
. |
- |
. |
ID=Dca3031.1.exon1;Parent=Dca3031.1 |
| scaffold1106 |
Augustus |
exon |
15106 |
15381 |
. |
- |
. |
ID=Dca3031.1.exon2;Parent=Dca3031.1 |
| scaffold1106 |
Augustus |
exon |
15565 |
17019 |
. |
- |
. |
ID=Dca3031.1.exon3;Parent=Dca3031.1 |
| scaffold1106 |
Augustus |
exon |
17668 |
18862 |
. |
- |
. |
ID=Dca3031.1.exon4;Parent=Dca3031.1 |
