Carnation DB

Dca30311.1

Annotation

7-exons
f-1
sp|B9T5U9_RICCO#GTP-binding protein yptv3, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0425560#GO:0005622;GO:0005524;GO:0005525;GO:0008134;GO:0006355;GO:0007264#3F2P1C
Repeat List (scaffold3022)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30311.1	1	335	335	75.22	335	75	6e-144
Target_name	Start	End	Length	Cov(%)
sp\|B9T5U9_RICCO	1	336	336	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30311.1	2	335	335	76.11	334	75	4e-141
Target_name	Start	End	Length	Cov(%)
AT5G64813.1	3	342	342	99.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3022	Augus-PASA	mRNA	10283	13355	.	-	.	ID=Dca30311.1;Parent=Dca30311
scaffold3022	Augus-PASA	exon	10283	10475	.	-	.	ID=Dca30311.1.exon1;Parent=Dca30311.1
scaffold3022	Augus-PASA	exon	11070	11200	.	-	.	ID=Dca30311.1.exon2;Parent=Dca30311.1
scaffold3022	Augus-PASA	exon	11286	11339	.	-	.	ID=Dca30311.1.exon3;Parent=Dca30311.1
scaffold3022	Augus-PASA	exon	11804	12108	.	-	.	ID=Dca30311.1.exon4;Parent=Dca30311.1
scaffold3022	Augus-PASA	exon	12315	12456	.	-	.	ID=Dca30311.1.exon5;Parent=Dca30311.1
scaffold3022	Augustus	exon	12560	12651	.	-	.	ID=Dca30311.1.exon6;Parent=Dca30311.1
scaffold3022	Augustus	exon	13265	13355	.	-	.	ID=Dca30311.1.exon7;Parent=Dca30311.1